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KnowEnG: A knowledge engine for genomics
Seminars | 24 Jun 2016 | Contributor(s): Saurabh Sinha (presenter)
I will describe our on-going work on development of “Knowledge Engine for Genomics” (KnowEnG), an E-science framework for genomics where biomedical scientists will have access to powerful methods of data mining, network mining, and machine learning to extract knowledge out of genomics...
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KnowEnG: A knowledge engine for genomics
Seminars | 24 Jun 2016 | Contributor(s): Saurabh Sinha (presenter)
I will describe our on-going work on development of “Knowledge Engine for Genomics” (KnowEnG), an E-science framework for genomics where biomedical scientists will have access to powerful methods of data mining, network mining, and machine learning to extract knowledge out of genomics...
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More Rappture Objects
Seminars | 05 Apr 2010 | Contributor(s): Michael McLennan
Rappture is the Rapid APPlication infrastrucTURE, a toolkit within the HUBzero platform that makes it easy to develop a graphical user interface for scientific modeling tools.This talk picks up where Introducing the Rappture Toolkit left off, showing how to create more complex arrangements of...
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NanoElectronic Modeling with the NEMO toolkit on nanoHUB
Seminars | 08 Oct 2014 | Contributor(s): Jim Fonseca, Gerhard Klimeck
330,000 users visited nanoHUB in the past year to learn about and do research using 330 nanotechnology simulation tools and 4,200 resources. The NEMO NanoElectronicsMOdelling engines power several of these Rappture based nanoHUB tools, each with a focus on the study of electronic properties of...
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NCIPHub.org – A Collaborative for Informatics in Cancer Research
Seminars | 08 Oct 2014 | Contributor(s): Ishwar Chandramouliswaran
An objective of the National Cancer Informatics Program at the National Cancer Institute is to facilitate open innovation and scientific collaboration in informatics to accelerate discovery in the cancer research community. The NCIP Hub is a HUBzero-based project and is intended to serve as an...
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Putting the "I" Back in CIO
Seminars | 08 Oct 2014 | Contributor(s): Gerry McCartney
No new technology has the potential to make or break IT like data science. For the CIO, the promise of a strategic role in the organization has always been contained in the "I" in the title: technology has just been an operational opening act. For the first time, we can deliver...
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QUBES: A community supporting teaching and learning in quantitative biology
Seminars | 24 Jun 2016 | Contributor(s): Michael Drew LaMar (presenter)
QUBES (Quantitative Undergraduate Biology Education and Synthesis) is a 5-year, multi-institutional NSF-funded project to address a “call to action” in reports put forth by many institutions, including NSF, NIH, AAAS, and HHMI, among others. The challenges in these reports include...
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QUBES: A community supporting teaching and learning in quantitative biology
Seminars | 24 Jun 2016 | Contributor(s): Michael Drew LaMar (presenter)
QUBES (Quantitative Undergraduate Biology Education and Synthesis) is a 5-year, multi-institutional NSF-funded project to address a “call to action” in reports put forth by many institutions, including NSF, NIH, AAAS, and HHMI, among others. The challenges in these reports include...
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Rappture with C and Fortran
Seminars | 21 Jun 2009 | Contributor(s): Michael McLennan
Rappture is the Rapid application infrastructure, a toolkit within the HUBzero platform that makes it easy to develop a graphical user interface for scientific modeling tools. Many such tools are written in C and Fortran.This talk picks up where Introducing the Rappture Toolkit and Review of...
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Rappture with C and Fortran
Seminars | 05 Apr 2010 | Contributor(s): Michael McLennan
Rappture is the Rapid APPlication infrastrucTURE, a toolkit within the HUBzero platform that makes it easy to develop a graphical user interface for scientific modeling tools. Many such tools are written in C and Fortran.This talk picks up where "Introducing the Rappture Toolkit" left off,...
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Red Cloud
Seminars | 08 Oct 2014 | Contributor(s): David Lifka
Red Cloud is an Infrastructure as a Service (IaaS) offered by the Cornell University Center for Advanced Computing. Red Cloud is a hybrid-cloud that runs the open source Eucalyptus cloud computing platform which is fully Amazon Web Service (AWS) compatible and provides the ability for users to...
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Regression Testing
Seminars | 02 Apr 2011 | Contributor(s): Michael McLennan
This talk describes the new Rappture Regression Tester tool, which executes a series of tests that you define to verify the correct operation of your tool. Use this tool as you fix bugs and introduce new features, to make sure that your tool continues to function correctly in all cases.
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Remote Sensing Analysis on HUBzero
Seminars | 24 Jun 2016 | Contributor(s): Larry Biehl (presenter)
MultiSpec is a remote sensing analysis tool being developed on MyGeoHub.org as part of the Geospatial Analysis Building Blocks (GABBs) NSF-funded and the IndianaView/AmericaView USGS-funded projects. The tool has been adapted from the desktop Macintosh and Windows versions...
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Remote Sensing Analysis on HUBzero
Seminars | 24 Jun 2016 | Contributor(s): Larry Biehl (presenter)
MultiSpec is a remote sensing analysis tool being developed on MyGeoHub.org as part of the Geospatial Analysis Building Blocks (GABBs) NSF-funded and the IndianaView/AmericaView USGS-funded projects. The tool has been adapted from the desktop Macintosh and Windows versions...
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RWater: A WaterHub tool for K-12 School Hydrology Education
Seminars | 09 Oct 2014 | Contributor(s): Adnan Rajib, Venkatesh Merwade, Lan Zhao, Carol Song
Enhancing students’ analytical ability of interpreting complex hydrologic processes from limited classroom environment has been a subject of long-standing research. From this perspective, a new internet-based educational tool, called RWater, is developed using HUBzero based WaterHUB. The...
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State of the Hub: 2014
Seminars | 08 Oct 2014 | Contributor(s): Michael McLennan
Welcoming remarks at HUBbub 2014.
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Teaching Big Data analysis in the Social Sciences using a HUBzero-based platform
Seminars | 08 Oct 2014 | Contributor(s): Jeanette M Sperhac, Steve Gallo, Jim B Greenberg, Brian Lowe, Bill Wilkerson, Greg Fulkerson, Brett Heindl
Large datasets culled from social media can easily grow to a size beyond the analytical capability of common software tools. Undergraduate institutions such as comprehensive colleges often lack the computing infrastructure and support personnel needed to allow students and researchers to create,...
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The GABBs Report – Building Geospatial Capabilities in HUBzero
Seminars | 24 Jun 2016 | Contributor(s): Carol Song (presenter)
Geospatial data are present everywhere today with the proliferation of location-aware computing devices. This is especially true in the scientific community where large amounts of data are driving research and education activities in many domains. Collaboration over geospatial data, for example,...
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The GABBs Report – Building Geospatial Capabilities in HUBzero
Seminars | 24 Jun 2016 | Contributor(s): Carol Song (presenter)
Geospatial data are present everywhere today with the proliferation of location-aware computing devices. This is especially true in the scientific community where large amounts of data are driving research and education activities in many domains. Collaboration over geospatial data, for example,...
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The Hub Concept for Scientific Collaboration
Publications | 02 Feb 2010 | Contributor(s): Michael McLennan
The software that powers the popular nanoHUB.org site has been extracted into package called the HUBzero Platform for Scientific Collaboration. The Rosen Center for Advanced Computing, the research computing group at Purdue University, has been using this package for two years to create a...