Cyberinfrastructure and Scientific Portals at the University of Notre Dame

By Jarek Nabrzyski

University of Notre Dame

Category

Seminars

Published on

Abstract

HUBzero is growing leaps and bounds these days, powering everything from simple collaborative websites to compute intensive portals such as nanoHUB. Does this mean it's a great fit for any website? When should HUBzero be used, and when other tools are a better fit? In this talk I will present Notre Dame's Center for Research Computing experiences with building science gateways, where both, HUBzero and non-HUBzero solutions were used.

Bio

Jarek Nabrzyski is director of the University of Notre Dame's Center for Research Computing (CRC). Before coming to Notre Dame Nabrzyski worked at LSU's Center for Computation and Technology, and before that, at Poznan Supercomputing and Networking Center (PSNC). It was at PSNC where he got first interested in building science gateways and middleware tools. During his 13 years at PSNC Nabrzyski has built a team that developed and supported the GridSphere portlet framework, and later the VineToolkit framework. Both were used by many grid computing collaborations worldwide.

Within his last three years at Notre Dame Nabrzyski was involved in supporting many research projects. CRC's Interactive Collaborative Environments team developed many science portals / gateways, including some that used the HUBZero framework.

Nabrzyski has received his M.Sc. and Ph.D. in Computer Science and Engineering from the Poznan University of Technology in Poland.

Cite this work

Researchers should cite this work as follows:

  • Jarek Nabrzyski (2012), "Cyberinfrastructure and Scientific Portals at the University of Notre Dame," https://help.hubzero.org/resources/786.

    BibTex | EndNote

Cyberinfrastructure and Scientific Portals at the University of Notre Dame
by: Jarek Nabrzyski
  • Cyberinfrastructure and Scientific Portals at Notre Dame Jarek Nabrzyski Center for Research Computing naber@nd.edu, http://crc.nd.edu 1. Cyberinfrastructure and Scient… 0
    00:00/00:00
  • Center for Research Computing 2. Center for Research Computing 36.236236236236238
    00:00/00:00
  • Mission 3. Mission 188.58858858858861
    00:00/00:00
  • Vision 4. Vision 195.72906239572907
    00:00/00:00
  • Jarek’s thoughts (May-August 2009) 5. Jarek’s thoughts (May-August… 211.41141141141142
    00:00/00:00
  • Workflow 6. Workflow 336.93693693693695
    00:00/00:00
  • Cyberinfrastructure Group 7. Cyberinfrastructure Group 361.36136136136139
    00:00/00:00
  • Old times … (oh, I miss them) 8. Old times … (oh, I miss them… 440.07340674007344
    00:00/00:00
  • Today… 9. Today… 536.7367367367367
    00:00/00:00
  • Peace Accords Matrix 10. Peace Accords Matrix 653.35335335335333
    00:00/00:00
  • Varieties of Democracy (VoD) 11. Varieties of Democracy (VoD) 763.46346346346354
    00:00/00:00
  • Varieties of Democracy (VoD) 12. Varieties of Democracy (VoD) 800.16683350016683
    00:00/00:00
  • Varieties of Democracy (VoD) 13. Varieties of Democracy (VoD) 836.97030363697036
    00:00/00:00
  • Varieties of Democracy (VoD) 14. Varieties of Democracy (VoD) 858.12479145812483
    00:00/00:00
  • Varieties of Democracy (VoD) 15. Varieties of Democracy (VoD) 885.95261928595266
    00:00/00:00
  • Cyber-Eye 16. Cyber-Eye 893.5935935935936
    00:00/00:00
  • Cyber-Eye Hurricane Situational Awareness Application 17. Cyber-Eye Hurricane Situationa… 921.654988321655
    00:00/00:00
  • Cyber-Eye 18. Cyber-Eye 965.53219886553222
    00:00/00:00
  • Geoanalytics (collaboration with RENCI) 19. Geoanalytics (collaboration wi… 1004.7047047047048
    00:00/00:00
  • SPACES - Niche Modeling Framework Spatial Portal for Analysis of Change in Environment on Species 20. SPACES - Niche Modeling Framew… 1034.0674007340674
    00:00/00:00
  • SPACES 21. SPACES 1049.3493493493495
    00:00/00:00
  • Features 22. Features 1079.512846179513
    00:00/00:00
  • SPACES experiment 23. SPACES experiment 1091.257924591258
    00:00/00:00
  • Select SDM algorithms 24. Select SDM algorithms 1114.9482816149484
    00:00/00:00
  • Untitled: Slide 25 25. Untitled: Slide 25 1138.3383383383384
    00:00/00:00
  • Results: SDM algorithm : Envelope Score 26. Results: SDM algorithm : Envel… 1141.0744077410745
    00:00/00:00
  • Results: SDM algorithm : Desktop GARP 27. Results: SDM algorithm : Deskt… 1166.4330997664331
    00:00/00:00
  • Results: SDM algorithm : Environmental Distance 28. Results: SDM algorithm : Envir… 1167.6343009676343
    00:00/00:00
  • Untitled: Slide 29 29. Untitled: Slide 29 1169.0690690690692
    00:00/00:00
  • Untitled: Slide 30 30. Untitled: Slide 30 1252.3857190523859
    00:00/00:00
  • Malaria Projects at Notre Dame 31. Malaria Projects at Notre Dame 1291.6583249916585
    00:00/00:00
  • Untitled: Slide 32 32. Untitled: Slide 32 1399.3660326993661
    00:00/00:00
  • Collaboratory is a virtual organization relying on cyber infrastructure for data sharing and modeling, shared computational resources, networking, community building, expert advise and to pursue pioneering inter- disciplinary integration and sound policy development. 33. Collaboratory is a virtual org… 1452.6526526526527
    00:00/00:00
  • Tempest iOS Application 34. Tempest iOS Application 1544.0106773440107
    00:00/00:00
  • Tempest iOS Application 35. Tempest iOS Application 1569.96996996997
    00:00/00:00
  • Tempest iOS Application 36. Tempest iOS Application 1634.3677010343677
    00:00/00:00
  • Much more than a digital book, The Tempest for iPad is designed for social reading, authoring, and sharing, for all readers from students to professional scholars. 37. Much more than a digital book,… 1662.595929262596
    00:00/00:00
  • Enjoy a full-length audio performance from the noted company Actors From the London Stage. Play text scrolls as you listen. Additional audio takes provide alternative performances of key passages. 38. Enjoy a full-length audio perf… 1688.355021688355
    00:00/00:00
  • Share your notes immediately to a Facebook discussion group 39. Share your notes immediately t… 1707.4074074074074
    00:00/00:00
  • Create your own play text. Select key passages you like, annotate them, and share with friends, colleagues, and readers worldwide. 40. Create your own play text. Sel… 1724.0907574240907
    00:00/00:00
  • Illustrations, podcasts and video from The Folger Shakespeare Library's collection bring alive Renaissance English culture and theater. 41. Illustrations, podcasts and vi… 1728.9289289289291
    00:00/00:00
  • Customize your experience. Quiet when you need it, social when you want it. 42. Customize your experience. Qui… 1734.7347347347347
    00:00/00:00
  • Summary 43. Summary 1758.9923256589923
    00:00/00:00
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