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KnowEnG: A knowledge engine for genomics
24 Jun 2016 | | Contributor(s):: Saurabh Sinha (presenter)
I will describe our on-going work on development of “Knowledge Engine for Genomics” (KnowEnG), an E-science framework for genomics where biomedical scientists will have access to powerful methods of data mining, network mining, and machine learning to extract knowledge out of genomics...
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How Cyberinfrastructure is Advancing the Frontiers of Science
24 Jun 2016 | | Contributor(s):: Amy Walton (presenter)
NSF is involved in a number of challenging research initiatives, such as understanding the human brain; making interdependent critical infrastructure systems more resilient; securing and protecting food, energy and water resources; designing cyber-enabled materials that sense, respond and adapt...
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Sep 14 2015
HUBbub 2015!
HUBbub 2015: The Annual HUBzero® User ConferenceThis two-day symposium will have presentations and workshops showing how the unique HUBzero open source software solution has empowered a wide...
https://help.hubzero.org/events/details/819
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Hub Users' Group
17 Nov 2014 | | Contributor(s):: Ann Bessenbacher (presenter)
The Hub Users' Group meeting at HUBbub 2014. Discussion led by Ann Bessenbacher.
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HUBbub 2014, Days 1 & 2, Track 3: Tool Development Training
16 Oct 2014 | | Contributor(s):: Derrick Kearney (presenter)
The HUBbub Tool Development training session on Sept. 29-30, 2014 covered the following topics:Using Simulation WorkspacesIntroducing the Rappture ToolkitWhat's Under the Hood?Using Rappture with MATLAB, C, and FortranMore Rappture ObjectsUsing "submit" for job submissionsUsing...
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HUBbub 2014, Days 1 & 2, Track 2: Web Development Training
13 Oct 2014 |
This track was a live demo of the documentation found here: https://hubzero.org/documentation/1.3.0/webdevs/components. The HUBzero web developers covered these specific topics:Getting your component up and runningWorking with dataAdding extensions to your componentSecurity considerations (slides...
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HUBbub 2014, Day 1 Morning Sessions
09 Oct 2014 |
HUBbub Plenary sessions on Sept. 29, 2014:State of the Hub: 2014 by Michael McLennanPutting the "I" Back in CIO by Gerry McCartneyBuilding the real-time hub by Andy Burnett and David LomasNCIPHub.org – A Collaborative for Informatics in Cancer Research by Ishwar...
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RWater: A WaterHub tool for K-12 School Hydrology Education
09 Oct 2014 | | Contributor(s):: Adnan Rajib, Venkatesh Merwade, Lan Zhao, Carol Song
Enhancing students’ analytical ability of interpreting complex hydrologic processes from limited classroom environment has been a subject of long-standing research. From this perspective, a new internet-based educational tool, called RWater, is developed using HUBzero based WaterHUB. The...
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A Geospatial Search Component for HUBzero
09 Oct 2014 | | Contributor(s):: Tao Zhang, Brandon M Beatty, Christopher Cody Charles, Nicole Kong
In this presentation, we report the development of a map-based component for browsing and searching for members, events, and jobs information on HABRI (Human-Animal Bond Research Initiative) Central, a HUBzero-based digital library project jointly run by between Purdue Libraries and...
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Fez: a Hatrack for your Metadata
09 Oct 2014 | | Contributor(s):: Sam Wilson, Nathan Denny
Research data is being generated and modified at an increasingly accelerated rate. Iterations and derivations are being crafted at an almost equal velocity. With this increase comes a growing need to track the metadata about the data being generated. This data is currently typically housed in...
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AgMIP Data Aggregator: Leveraging Globus Online and HUBzero to Make Global Spatial Data Accessible
09 Oct 2014 | | Contributor(s):: Lan Zhao, Carol Song, Nelson B. Villoria, Hongjun Choi, Steven Clark
As part of the Agricultural Model Intercomparison and Improvement Project (AgMIP, http://www.agmip.org), the Global Gridded Crop Model Intercomparison group ran a suite of global climate models and crop models to estimate historical and future changes in yields for crops under different climate...
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Developing a Collaborative Environment for Useful to Usable Project
09 Oct 2014 | | Contributor(s):: Larry Biehl (presenter), Carol Song, Lan Zhao, Christopher Panza, Brian Raub, Luke Policinski
HUBzero is being used as a collaborative environment for the Useful to Usable (U2U) project funded by the USDA. U2U is an integrated research and extension project working to improve farm resilience and profitability in the North Central U.S. by transforming existing climate data into usable...
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Developing Geospatial Modeling and Data Analysis Building Blocks in HUBzero (GABBs)
09 Oct 2014 | | Contributor(s):: Carol Song, Larry Biehl, Venkatesh Merwade, Nelson Villoria
Responding to the need for geospatial tool and data capabilities in HUBzero from various communities, a Purdue team is developing and integrating geospatial capabilities into the HUBzero software. Funded by the National Science Foundation’s Data Infrastructure Building Blocks (DIBBs)...
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Future Directions
09 Oct 2014 | | Contributor(s):: Michael McLennan, Shawn Rice
HUBzero Roadmap and the Future of the CMSWhere we've been, where we are, and where we're going. A brief look at the direction of and changes to HUBzero's Content Management System.
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Center for Trustworthy Scientific Cyberinfrastructure
09 Oct 2014 | | Contributor(s):: Von Welch
The Center for Trustworthy Scientific Cyberinfrastructure (CTSC / trustedci.org) is a NSF-funded project to provide cybersecurity leadership and applied research for the NSF scientific computing community. CTSC has engaged with nearly a dozen NSF project on cybersecurity challenges as well as...
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The Vhub experience – online simulations are the water coolers...
09 Oct 2014 | | Contributor(s):: Abani K. Patra
In this talk we will discuss the growth and evolution of vhub.org an online collaboratory for volcanology. Volcanology is a complex discipline with a wide range of skillsets from field work, laboratory work, complex data gathering and analysis, mechanics, modeling and simulation all used in an...
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Who are we talking about? The Role of Person Identifiers in Scholarly Communications
08 Oct 2014 | | Contributor(s):: Laura Paglione
Persistent unique identifiers have been a mainstay in scholarly communication for many years. It would be difficult to think of precisely describing a book without its ISBN or an article without its DOI. Until recently, identifiers most commonly referred to the activities or outcomes of research,...
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CyberInfrastructure for Computational Science
08 Oct 2014 | | Contributor(s):: Victoria Stodden
From funding agency initiatives to changes in research and teaching practices, it is becoming widely recognized that computational environments are a key component in the generation of reliable scientific results. In this talk I trace some of the history of Problem Solving Environments (PSEs),...
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A Multi OS Hub Approach: Integrating the Windows Operating System Into the Hub
08 Oct 2014 | | Contributor(s):: Christopher Joseph Nuland
The Linux operating system lends itself nicely to the Hub platform and tool sets. However, Microsoft Windows is still the most widely used in nearly all industries. For research heavy industries, like nano technology or genetics, Linux is the main operating system of choice; but for industries...
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Inter-Institutional Collaboration for Research in Information Security
08 Oct 2014 | | Contributor(s):: Courtney Falk, Lauren Stuart
The Information Security Research and Education (INSuRE) project has a two-fold mission. First is to build a persistent, distributed network of research collaboration between the Centers for Academic Excellence in Research (CAE-R) at different universities. No such formal framework for...